PHPackages tripalcultivate/germplasm - PHPackages - PHPackages [Skip to content](#main-content)[PHPackages](/)[Directory](/)[Categories](/categories)[Trending](/trending)[Leaderboard](/leaderboard)[Changelog](/changelog)[Analyze](/analyze)[Collections](/collections)[Log in](/login)[Sign up](/register) 1. [Directory](/) 2. / 3. [Utility & Helpers](/categories/utility) 4. / 5. tripalcultivate/germplasm ActiveDrupal-module[Utility & Helpers](/categories/utility) tripalcultivate/germplasm ========================= A Tripal extension module that provides specialized fields and importers for germplasm. 4.x-dev(2mo ago)17[13 issues](https://github.com/TripalCultivate/TripalCultivate-Germplasm/issues)[2 PRs](https://github.com/TripalCultivate/TripalCultivate-Germplasm/pulls)GPL-3.0-or-laterPHPPHP ^8.2CI passing Since Aug 21Pushed 1mo ago4 watchersCompare [ Source](https://github.com/TripalCultivate/TripalCultivate-Germplasm)[ Packagist](https://packagist.org/packages/tripalcultivate/germplasm)[ Docs](https://github.com/TripalCultivate/TripalCultivate-Germplasm)[ RSS](/packages/tripalcultivate-germplasm/feed)WikiDiscussions 4.x Synced 1mo ago READMEChangelogDependencies (3)Versions (7)Used By (0) Tripal Cultivate: Germplasm =========================== [](#tripal-cultivate-germplasm) **Developed by the University of Saskatchewan, Pulse Crop Bioinformatics team.** **NOTE: This package will replace the following Tripal v3 module: [uofspb\_germplasm](https://github.com/UofS-Pulse-Binfo/uofspb_germplasm/tree/7.x-3.x).** - Germplasm importers - bulk import of germplasm crosses and accessions into the database - Germplasm collections - supports groupings of germplasm into collections - a specialized field for a table listing of a germplasm collection - a field to list germplasm collection(s) on a project page - RIL Summary - provides a tabular germplasm matrix summarizing the number of RILs available for each species used as a parent - A RIL listing for a specific species combination that includes the current progress of RIL development - A field for RIL germplasm pages to summarize development progression Citation -------- [](#citation) If you use this module in your Tripal site, please use this citation to reference our work any place where you described your resulting Tripal site. For example, if you publish your site in a journal then this citation should be in the reference section and anywhere functionality provided by this module is discussed in the above text should reference it. > Lacey-Anne Sanderson, Carolyn T Caron and Reynold Tan (2023). TripalCultivate Germplasm: Specialized Tripal fields and importers for germplasm. Development Version. University of Saskatchewan, Pulse Crop Research Group, Saskatoon, SK, Canada. Install ------- [](#install) Using composer, add this package to your Drupal site by using the following command in the root of your Drupal site: ``` composer require tripalcultivate/germplasm ``` This will download the most recent release in the modules directory. You can see more information in [the Drupal Docs](https://www.drupal.org/docs/develop/using-composer/manage-dependencies). Then you can install it using Drush or the Extensions page on your Drupal site. ``` drush en trpcultivate_germplasm ``` Technology Stack ---------------- [](#technology-stack) *See specific version compatibility in the automated testing section below.* - Drupal - Tripal 4.x - PostgreSQL - PHP - Apache2 ### Automated Testing [](#automated-testing) This package is dedicated to a high standard of automated testing. We use PHPUnit for testing and QLTY Cloud to ensure good test coverage and maintainability. There are more details on [our QLTY Cloud project page](https://qlty.sh/gh/TripalCultivate/projects/TripalCultivate-Germplasm) describing our specific maintainability issues and test coverage. [![Maintainability](https://camo.githubusercontent.com/874583844ec075a3e780889f532a60139d996cb06f7ff002a94a4dacd53d6106/68747470733a2f2f716c74792e73682f67682f54726970616c43756c7469766174652f70726f6a656374732f54726970616c43756c7469766174652f6d61696e7461696e6162696c6974792e737667)](https://qlty.sh/gh/TripalCultivate/projects/TripalCultivate-Germplasm)[![Code Coverage](https://camo.githubusercontent.com/259d8771c42d69d07c7322b60128f7eb756af61d7dbe00499f158445a5a1fe76/68747470733a2f2f716c74792e73682f67682f54726970616c43756c7469766174652f70726f6a656374732f54726970616c43756c7469766174652f636f7665726167652e737667)](https://qlty.sh/gh/TripalCultivate/projects/TripalCultivate-Germplasm) The following compatibility is proven via automated testing workflows. PHP\\Drupal10.5.x-dev10.6.x-dev11.2.x-dev11.3.x-dev**PHP8.2**[![Grid82-105-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.2_D10_5x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.2_D10_5x.yml/badge.svg)[![Grid82-106-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.2_D10_6x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.2_D10_6x.yml/badge.svg)**PHP8.3**[![Grid83-105-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D10_5x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D10_5x.yml/badge.svg)[![Grid83-106-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D10_6x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D10_6x.yml/badge.svg)[![Grid83-112-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D11_2x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D11_2x.yml/badge.svg)[![Grid83-113-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D11_3x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.3_D11_3x.yml/badge.svg)**PHP8.4**[![Grid84-105-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D10_5x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D10_5x.yml/badge.svg)[![Grid84-106-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D10_6x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D10_6x.yml/badge.svg)[![Grid84-112-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D11_2x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D11_2x.yml/badge.svg)[![Grid84-113-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D11_3x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.4_D11_3x.yml/badge.svg)**PHP8.5**[![Grid85-113-Badge](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.5_D11_3x.yml/badge.svg)](https://github.com/TripalCultivate/TripalCultivate-Germplasm/actions/workflows/MAIN-phpunit-php8.5_D11_3x.yml/badge.svg) ### Health Score 33 — LowBetter than 75% of packages Maintenance70 Regular maintenance activity Popularity6 Limited adoption so far Community13 Small or concentrated contributor base Maturity38 Early-stage or recently created project Bus Factor2 2 contributors hold 50%+ of commits How is this calculated?**Maintenance (25%)** — Last commit recency, latest release date, and issue-to-star ratio. Uses a 2-year decay window. **Popularity (30%)** — Total and monthly downloads, GitHub stars, and forks. Logarithmic scaling prevents top-heavy scores. **Community (15%)** — Contributors, dependents, forks, watchers, and maintainers. Measures real ecosystem engagement. **Maturity (30%)** — Project age, version count, PHP version support, and release stability. ### Release Activity Cadence Unknown Total 1 Last Release 61d ago ### Community Maintainers ![](https://www.gravatar.com/avatar/4083b15618278dd53dc26863d5c81888ac49acca3850166f8b3e0cac18ff611b?d=identicon)[uofs-pulse-binfo](/maintainers/uofs-pulse-binfo) --- Top Contributors [![carolyncaron](https://avatars.githubusercontent.com/u/7927760?v=4)](https://github.com/carolyncaron "carolyncaron (136 commits)")[![vidu-wil](https://avatars.githubusercontent.com/u/132868285?v=4)](https://github.com/vidu-wil "vidu-wil (104 commits)")[![laceysanderson](https://avatars.githubusercontent.com/u/1566301?v=4)](https://github.com/laceysanderson "laceysanderson (34 commits)")[![reynoldtan](https://avatars.githubusercontent.com/u/15472253?v=4)](https://github.com/reynoldtan "reynoldtan (18 commits)") --- Tags drupaldata-importvisualizationtripalbiological-datadata-collectiongermplasm-data ### Embed Badge ![Health badge](/badges/tripalcultivate-germplasm/health.svg) ``` [![Health](https://phpackages.com/badges/tripalcultivate-germplasm/health.svg)](https://phpackages.com/packages/tripalcultivate-germplasm) ``` ### Alternatives [tripal/tripal Tripal is a toolkit to facilitate construction of online genomic, genetic (and other biological) websites. 709.9k9](/packages/tripal-tripal) PHPackages © 2026 [Directory](/)[Categories](/categories)[Trending](/trending)[Changelog](/changelog)[Analyze](/analyze)